STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN70848.1Helix-turn-helix. (162 aa)    
Predicted Functional Partners:
SDM25796.1
Streptomyces sporulation and cell division protein, SsgA.
  
   
 0.782
SDM79821.1
Streptomyces sporulation and cell division protein, SsgA.
  
   
 0.782
SDN68397.1
Streptomyces sporulation and cell division protein, SsgA.
  
   
 0.777
SDN33641.1
dTMP kinase.
  
 
  0.725
SDN19089.1
Hypothetical protein.
  
   
 0.710
pyrR
Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.
     
 0.708
SDN54103.1
Hypothetical protein.
  
     0.674
SDN59984.1
YacP-like NYN domain-containing protein.
  
     0.672
SDM19426.1
Hypothetical protein.
  
     0.666
SDN32560.1
Dipeptidyl aminopeptidase/acylaminoacyl peptidase.
  
     0.659
Your Current Organism:
Allokutzneria albata
NCBI taxonomy Id: 211114
Other names: A. albata, ATCC 55061, DSM 44149, JCM 9917, Kibdelosporangium albatum, NBRC 101910, NRRL B-24461, strain R761-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.