STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCC6912_20600Unannotated protein. (224 aa)    
Predicted Functional Partners:
PCC6912_20620
Unannotated protein.
 
     0.941
GCA_000317285_00084
Unannotated protein.
 
     0.879
PCC6912_44730
Unannotated protein.
 
 
  0.815
PCC6912_14790
Unannotated protein.
 
  
 0.801
PCC6912_20770
Unannotated protein.
 
     0.786
PCC6912_61010
Unannotated protein.
 
 
  0.785
PCC6912_20990
Unannotated protein.
 
     0.777
PCC6912_21000
Unannotated protein.
  
     0.774
PCC6912_20610
Unannotated protein.
       0.773
PCC6912_20330
Unannotated protein.
  
     0.748
Your Current Organism:
Chlorogloeopsis fritschii
NCBI taxonomy Id: 211165
Other names: C. fritschii PCC 6912, Chlorogloeopsis fritschii PCC 6912, Chlorogloeopsis fritschii str. PCC 6912, Chlorogloeopsis sp. ATCC 27193, Chlorogloeopsis sp. DSM 101459, Chlorogloeopsis sp. PCC 6912
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.