Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PCC6912_25360 | hypA | GCA_000317285_00449 | GCA_000317285_00448 | Unannotated protein; Belongs to the arginase family. | Unannotated protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | 0.914 |
PCC6912_25360 | hypB | GCA_000317285_00449 | GCA_000317285_00447 | Unannotated protein; Belongs to the arginase family. | Unannotated protein. | 0.829 |
PCC6912_25360 | ureC | GCA_000317285_00449 | GCA_000317285_02436 | Unannotated protein; Belongs to the arginase family. | Unannotated protein. | 0.625 |
hypA | PCC6912_25360 | GCA_000317285_00448 | GCA_000317285_00449 | Unannotated protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | Unannotated protein; Belongs to the arginase family. | 0.914 |
hypA | hypB | GCA_000317285_00448 | GCA_000317285_00447 | Unannotated protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | Unannotated protein. | 0.988 |
hypA | hypC | GCA_000317285_00448 | GCA_000317285_03812 | Unannotated protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | Unannotated protein. | 0.695 |
hypA | hypD | GCA_000317285_00448 | GCA_000317285_03813 | Unannotated protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | Unannotated protein. | 0.722 |
hypA | hypE | GCA_000317285_00448 | GCA_000317285_03815 | Unannotated protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | Unannotated protein. | 0.701 |
hypA-2 | hypB | GCA_000317285_03816 | GCA_000317285_00447 | Unannotated protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | Unannotated protein. | 0.954 |
hypA-2 | hypC | GCA_000317285_03816 | GCA_000317285_03812 | Unannotated protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | Unannotated protein. | 0.884 |
hypA-2 | hypD | GCA_000317285_03816 | GCA_000317285_03813 | Unannotated protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | Unannotated protein. | 0.888 |
hypA-2 | hypE | GCA_000317285_03816 | GCA_000317285_03815 | Unannotated protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | Unannotated protein. | 0.923 |
hypB | PCC6912_25360 | GCA_000317285_00447 | GCA_000317285_00449 | Unannotated protein. | Unannotated protein; Belongs to the arginase family. | 0.829 |
hypB | hypA | GCA_000317285_00447 | GCA_000317285_00448 | Unannotated protein. | Unannotated protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | 0.988 |
hypB | hypA-2 | GCA_000317285_00447 | GCA_000317285_03816 | Unannotated protein. | Unannotated protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | 0.954 |
hypB | hypC | GCA_000317285_00447 | GCA_000317285_03812 | Unannotated protein. | Unannotated protein. | 0.945 |
hypB | hypD | GCA_000317285_00447 | GCA_000317285_03813 | Unannotated protein. | Unannotated protein. | 0.947 |
hypB | hypE | GCA_000317285_00447 | GCA_000317285_03815 | Unannotated protein. | Unannotated protein. | 0.843 |
hypB | ureC | GCA_000317285_00447 | GCA_000317285_02436 | Unannotated protein. | Unannotated protein. | 0.832 |
hypB | ureD | GCA_000317285_00447 | GCA_000317285_02439 | Unannotated protein. | Unannotated protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. | 0.919 |
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