Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PCC6912_13320 | PCC6912_16450 | GCA_000317285_04082 | GCA_000317285_00902 | Unannotated protein. | Unannotated protein. | 0.642 |
PCC6912_13600 | PCC6912_16450 | GCA_000317285_04054 | GCA_000317285_00902 | Unannotated protein; Belongs to the glycosyl hydrolase 2 family. | Unannotated protein. | 0.679 |
PCC6912_13600 | PCC6912_31370 | GCA_000317285_04054 | GCA_000317285_01637 | Unannotated protein; Belongs to the glycosyl hydrolase 2 family. | Unannotated protein. | 0.895 |
PCC6912_16450 | PCC6912_13320 | GCA_000317285_00902 | GCA_000317285_04082 | Unannotated protein. | Unannotated protein. | 0.642 |
PCC6912_16450 | PCC6912_13600 | GCA_000317285_00902 | GCA_000317285_04054 | Unannotated protein. | Unannotated protein; Belongs to the glycosyl hydrolase 2 family. | 0.679 |
PCC6912_16450 | PCC6912_20440 | GCA_000317285_00902 | GCA_000317285_00067 | Unannotated protein. | Unannotated protein. | 0.591 |
PCC6912_16450 | PCC6912_31370 | GCA_000317285_00902 | GCA_000317285_01637 | Unannotated protein. | Unannotated protein. | 0.601 |
PCC6912_16450 | PCC6912_38400 | GCA_000317285_00902 | GCA_000317285_02832 | Unannotated protein. | Unannotated protein. | 0.795 |
PCC6912_16450 | PCC6912_49390 | GCA_000317285_00902 | GCA_000317285_01084 | Unannotated protein. | Unannotated protein. | 0.669 |
PCC6912_16450 | PCC6912_49970 | GCA_000317285_00902 | GCA_000317285_01905 | Unannotated protein. | Unannotated protein. | 0.651 |
PCC6912_16450 | glgC | GCA_000317285_00902 | GCA_000317285_05051 | Unannotated protein. | Unannotated protein; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.651 |
PCC6912_16450 | rpoA | GCA_000317285_00902 | GCA_000317285_05827 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.675 |
PCC6912_16450 | rpoZ | GCA_000317285_00902 | GCA_000317285_04481 | Unannotated protein. | Unannotated protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.669 |
PCC6912_20440 | PCC6912_16450 | GCA_000317285_00067 | GCA_000317285_00902 | Unannotated protein. | Unannotated protein. | 0.591 |
PCC6912_31370 | PCC6912_13600 | GCA_000317285_01637 | GCA_000317285_04054 | Unannotated protein. | Unannotated protein; Belongs to the glycosyl hydrolase 2 family. | 0.895 |
PCC6912_31370 | PCC6912_16450 | GCA_000317285_01637 | GCA_000317285_00902 | Unannotated protein. | Unannotated protein. | 0.601 |
PCC6912_31370 | PCC6912_49970 | GCA_000317285_01637 | GCA_000317285_01905 | Unannotated protein. | Unannotated protein. | 0.401 |
PCC6912_31370 | glgC | GCA_000317285_01637 | GCA_000317285_05051 | Unannotated protein. | Unannotated protein; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.401 |
PCC6912_31370 | rpoA | GCA_000317285_01637 | GCA_000317285_05827 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.489 |
PCC6912_38400 | PCC6912_16450 | GCA_000317285_02832 | GCA_000317285_00902 | Unannotated protein. | Unannotated protein. | 0.795 |
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