Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PCC6912_29890 | PCC6912_49440 | GCA_000317285_01461 | GCA_000317285_01089 | Unannotated protein. | Unannotated protein. | 0.585 |
PCC6912_29890 | petE | GCA_000317285_01461 | GCA_000317285_05305 | Unannotated protein. | Unannotated protein; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I. | 0.493 |
PCC6912_37640 | PCC6912_49440 | GCA_000317285_06316 | GCA_000317285_01089 | Unannotated protein. | Unannotated protein. | 0.401 |
PCC6912_37640 | hisC | GCA_000317285_06316 | GCA_000317285_02530 | Unannotated protein. | Unannotated protein; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.461 |
PCC6912_37640 | hisC-2 | GCA_000317285_06316 | GCA_000317285_06011 | Unannotated protein. | Unannotated protein; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.549 |
PCC6912_37640 | ilvE | GCA_000317285_06316 | GCA_000317285_02136 | Unannotated protein. | Unannotated protein; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. | 0.550 |
PCC6912_38830 | PCC6912_49440 | GCA_000317285_02788 | GCA_000317285_01089 | Unannotated protein. | Unannotated protein. | 0.414 |
PCC6912_49440 | PCC6912_29890 | GCA_000317285_01089 | GCA_000317285_01461 | Unannotated protein. | Unannotated protein. | 0.585 |
PCC6912_49440 | PCC6912_37640 | GCA_000317285_01089 | GCA_000317285_06316 | Unannotated protein. | Unannotated protein. | 0.401 |
PCC6912_49440 | PCC6912_38830 | GCA_000317285_01089 | GCA_000317285_02788 | Unannotated protein. | Unannotated protein. | 0.414 |
PCC6912_49440 | PCC6912_49450 | GCA_000317285_01089 | GCA_000317285_01090 | Unannotated protein. | Unannotated protein. | 0.406 |
PCC6912_49440 | PCC6912_57490 | GCA_000317285_01089 | GCA_000317285_06416 | Unannotated protein. | Unannotated protein. | 0.401 |
PCC6912_49440 | hisC | GCA_000317285_01089 | GCA_000317285_02530 | Unannotated protein. | Unannotated protein; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.668 |
PCC6912_49440 | hisC-2 | GCA_000317285_01089 | GCA_000317285_06011 | Unannotated protein. | Unannotated protein; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.668 |
PCC6912_49440 | ilvE | GCA_000317285_01089 | GCA_000317285_02136 | Unannotated protein. | Unannotated protein; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. | 0.401 |
PCC6912_49440 | petE | GCA_000317285_01089 | GCA_000317285_05305 | Unannotated protein. | Unannotated protein; Participates in electron transfer between P700 and the cytochrome b6-f complex in photosystem I. | 0.408 |
PCC6912_49450 | PCC6912_49440 | GCA_000317285_01090 | GCA_000317285_01089 | Unannotated protein. | Unannotated protein. | 0.406 |
PCC6912_57490 | PCC6912_49440 | GCA_000317285_06416 | GCA_000317285_01089 | Unannotated protein. | Unannotated protein. | 0.401 |
PCC6912_57490 | hisC | GCA_000317285_06416 | GCA_000317285_02530 | Unannotated protein. | Unannotated protein; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.461 |
PCC6912_57490 | hisC-2 | GCA_000317285_06416 | GCA_000317285_06011 | Unannotated protein. | Unannotated protein; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.461 |
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