STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCC6912_08450Unannotated protein. (908 aa)    
Predicted Functional Partners:
PCC6912_08440
Unannotated protein.
     0.867
PCC6912_02360
Unannotated protein.
  
 
   0.763
PCC6912_49860
Unannotated protein.
   
   0.738
PCC6912_19170
Unannotated protein.
    
   0.733
PCC6912_16290
Unannotated protein.
    
   0.733
PCC6912_32340
Unannotated protein.
    
   0.733
PCC6912_32270
Unannotated protein.
    
   0.733
chlM
Unannotated protein.
    
   0.733
PCC6912_12280
Unannotated protein.
    
   0.733
PCC6912_21560
Unannotated protein.
    
   0.733
Your Current Organism:
Chlorogloeopsis fritschii
NCBI taxonomy Id: 211165
Other names: C. fritschii PCC 6912, Chlorogloeopsis fritschii PCC 6912, Chlorogloeopsis fritschii str. PCC 6912, Chlorogloeopsis sp. ATCC 27193, Chlorogloeopsis sp. DSM 101459, Chlorogloeopsis sp. PCC 6912
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.