STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCC6912_35630Unannotated protein. (230 aa)    
Predicted Functional Partners:
ndbB
Unannotated protein.
     
  0.823
PCC6912_05330
Unannotated protein.
  
 
 0.780
PCC6912_55240
Unannotated protein.
    
 0.750
PCC6912_48750
Unannotated protein.
    
 0.750
PCC6912_48690
Unannotated protein; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.750
PCC6912_19790
Unannotated protein.
  
     0.737
PCC6912_64640
Unannotated protein.
   
 0.725
PCC6912_38960
Unannotated protein.
    
 0.723
PCC6912_44890
Unannotated protein.
    
 0.723
PCC6912_31370
Unannotated protein.
   
 0.720
Your Current Organism:
Chlorogloeopsis fritschii
NCBI taxonomy Id: 211165
Other names: C. fritschii PCC 6912, Chlorogloeopsis fritschii PCC 6912, Chlorogloeopsis fritschii str. PCC 6912, Chlorogloeopsis sp. ATCC 27193, Chlorogloeopsis sp. DSM 101459, Chlorogloeopsis sp. PCC 6912
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.