STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCC6912_28090Unannotated protein. (332 aa)    
Predicted Functional Partners:
PCC6912_28080
Unannotated protein.
     0.956
PCC6912_28480
Unannotated protein.
 
     0.787
PCC6912_36450
Unannotated protein.
  
     0.773
PCC6912_45050
Unannotated protein.
  
     0.749
ribA
Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.735
PCC6912_17660
Unannotated protein.
     
 0.720
PCC6912_36470
Unannotated protein.
 
   
 0.711
PCC6912_36460
Unannotated protein.
 
   
 0.706
PCC6912_29680
Unannotated protein.
  
 
  0.695
PCC6912_14730
Unannotated protein.
     
 0.673
Your Current Organism:
Chlorogloeopsis fritschii
NCBI taxonomy Id: 211165
Other names: C. fritschii PCC 6912, Chlorogloeopsis fritschii PCC 6912, Chlorogloeopsis fritschii str. PCC 6912, Chlorogloeopsis sp. ATCC 27193, Chlorogloeopsis sp. DSM 101459, Chlorogloeopsis sp. PCC 6912
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.