STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rubUnannotated protein; Belongs to the rubredoxin family. (111 aa)    
Predicted Functional Partners:
PCC6912_62890
Unannotated protein; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
    
 0.867
PCC6912_60400
Unannotated protein; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
    
 0.867
hybA
Unannotated protein.
  
 
 0.844
PCC6912_62190
Unannotated protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity.
 
   
 0.738
PCC6912_13150
Unannotated protein.
    
  0.738
dfa2
Unannotated protein.
 
  
 0.655
PCC6912_58650
Unannotated protein.
    
 0.650
PCC6912_21670
Unannotated protein; Belongs to the pyruvate kinase family.
    
 0.630
PCC6912_22340
Unannotated protein.
 
  
 0.618
PCC6912_14100
Unannotated protein.
 
  
 0.611
Your Current Organism:
Chlorogloeopsis fritschii
NCBI taxonomy Id: 211165
Other names: C. fritschii PCC 6912, Chlorogloeopsis fritschii PCC 6912, Chlorogloeopsis fritschii str. PCC 6912, Chlorogloeopsis sp. ATCC 27193, Chlorogloeopsis sp. DSM 101459, Chlorogloeopsis sp. PCC 6912
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.