STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCC6912_38620Unannotated protein; Belongs to the peptidase S41A family. (486 aa)    
Predicted Functional Partners:
PCC6912_38610
Unannotated protein.
       0.697
PCC6912_62890
Unannotated protein; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
    
   0.674
PCC6912_60400
Unannotated protein; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
    
   0.674
pheT
Unannotated protein; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
   
 
 0.636
secD
Unannotated protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
  
 
  0.632
PCC6912_39090
Unannotated protein.
  
  
 0.610
PCC6912_11520
Unannotated protein.
   
 0.534
PCC6912_48980
Unannotated protein.
 
 
 
 0.504
PCC6912_04810
Unannotated protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
   
   0.494
PCC6912_42310
Unannotated protein.
    
 0.473
Your Current Organism:
Chlorogloeopsis fritschii
NCBI taxonomy Id: 211165
Other names: C. fritschii PCC 6912, Chlorogloeopsis fritschii PCC 6912, Chlorogloeopsis fritschii str. PCC 6912, Chlorogloeopsis sp. ATCC 27193, Chlorogloeopsis sp. DSM 101459, Chlorogloeopsis sp. PCC 6912
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.