Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PCC6912_23990 | PCC6912_24010 | GCA_000317285_00589 | GCA_000317285_00587 | Unannotated protein. | Unannotated protein. | 0.908 |
PCC6912_23990 | cysE | GCA_000317285_00589 | GCA_000317285_02820 | Unannotated protein. | Unannotated protein. | 0.725 |
PCC6912_24010 | PCC6912_23990 | GCA_000317285_00587 | GCA_000317285_00589 | Unannotated protein. | Unannotated protein. | 0.908 |
PCC6912_24010 | PCC6912_61880 | GCA_000317285_00587 | GCA_000317285_06784 | Unannotated protein. | Unannotated protein. | 0.804 |
PCC6912_24010 | cysE | GCA_000317285_00587 | GCA_000317285_02820 | Unannotated protein. | Unannotated protein. | 0.758 |
PCC6912_24010 | cysK | GCA_000317285_00587 | GCA_000317285_01112 | Unannotated protein. | Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.934 |
PCC6912_24010 | cysK-2 | GCA_000317285_00587 | GCA_000317285_04302 | Unannotated protein. | Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.933 |
PCC6912_24010 | cysK-3 | GCA_000317285_00587 | GCA_000317285_05633 | Unannotated protein. | Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.934 |
PCC6912_24010 | cysM | GCA_000317285_00587 | GCA_000317285_04333 | Unannotated protein. | Unannotated protein. | 0.949 |
PCC6912_24010 | cysS | GCA_000317285_00587 | GCA_000317285_00914 | Unannotated protein. | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.802 |
PCC6912_24010 | cysS-2 | GCA_000317285_00587 | GCA_000317285_04196 | Unannotated protein. | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.802 |
PCC6912_24010 | metH | GCA_000317285_00587 | GCA_000317285_06674 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.761 |
PCC6912_61880 | PCC6912_24010 | GCA_000317285_06784 | GCA_000317285_00587 | Unannotated protein. | Unannotated protein. | 0.804 |
PCC6912_61880 | cysE | GCA_000317285_06784 | GCA_000317285_02820 | Unannotated protein. | Unannotated protein. | 0.778 |
PCC6912_61880 | cysS | GCA_000317285_06784 | GCA_000317285_00914 | Unannotated protein. | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.406 |
PCC6912_61880 | cysS-2 | GCA_000317285_06784 | GCA_000317285_04196 | Unannotated protein. | Unannotated protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.406 |
PCC6912_61880 | metH | GCA_000317285_06784 | GCA_000317285_06674 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.831 |
cysE | PCC6912_23990 | GCA_000317285_02820 | GCA_000317285_00589 | Unannotated protein. | Unannotated protein. | 0.725 |
cysE | PCC6912_24010 | GCA_000317285_02820 | GCA_000317285_00587 | Unannotated protein. | Unannotated protein. | 0.758 |
cysE | PCC6912_61880 | GCA_000317285_02820 | GCA_000317285_06784 | Unannotated protein. | Unannotated protein. | 0.778 |
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