STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCC6912_10430Unannotated protein. (253 aa)    
Predicted Functional Partners:
PCC6912_23800
Unannotated protein.
  
  0.717
PCC6912_18310
Unannotated protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.710
PCC6912_09960
Unannotated protein.
   
  0.675
PCC6912_08040
Unannotated protein.
   
  0.675
PCC6912_33590
Unannotated protein.
   
  0.675
PCC6912_43260
Unannotated protein.
 
      0.566
PCC6912_25580
Unannotated protein.
  
     0.509
miaA
Unannotated protein; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.
  
    0.477
PCC6912_65560
Unannotated protein.
    
 
 0.466
PCC6912_38030
Unannotated protein.
  
  
  0.431
Your Current Organism:
Chlorogloeopsis fritschii
NCBI taxonomy Id: 211165
Other names: C. fritschii PCC 6912, Chlorogloeopsis fritschii PCC 6912, Chlorogloeopsis fritschii str. PCC 6912, Chlorogloeopsis sp. ATCC 27193, Chlorogloeopsis sp. DSM 101459, Chlorogloeopsis sp. PCC 6912
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.