STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCC6912_53250Unannotated protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (511 aa)    
Predicted Functional Partners:
PCC6912_53260
Unannotated protein.
 
    0.948
PCC6912_58480
Unannotated protein.
 
 0.859
macB
Unannotated protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
   0.827
PCC6912_10330
Unannotated protein.
 
    0.825
PCC6912_55470
Unannotated protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.699
PCC6912_10320
Unannotated protein.
   0.699
PCC6912_35910
Unannotated protein.
  
 0.677
PCC6912_48390
Unannotated protein.
  
  0.594
PCC6912_55460
Unannotated protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  
  0.567
PCC6912_17540
Unannotated protein.
   
  0.565
Your Current Organism:
Chlorogloeopsis fritschii
NCBI taxonomy Id: 211165
Other names: C. fritschii PCC 6912, Chlorogloeopsis fritschii PCC 6912, Chlorogloeopsis fritschii str. PCC 6912, Chlorogloeopsis sp. ATCC 27193, Chlorogloeopsis sp. DSM 101459, Chlorogloeopsis sp. PCC 6912
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