STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCC6912_22770Unannotated protein; Catalyzes the decarbonylation of fatty aldehydes to alkanes. (231 aa)    
Predicted Functional Partners:
PCC6912_22780
Unannotated protein.
 
 
 
 0.991
PCC6912_55780
Unannotated protein.
  
     0.729
PCC6912_34190
Unannotated protein.
  
     0.695
PCC6912_37030
Unannotated protein.
  
     0.691
PCC6912_65270
Unannotated protein.
  
     0.672
PCC6912_12870
Unannotated protein.
  
     0.663
PCC6912_64830
Unannotated protein.
  
     0.634
PCC6912_64860
Unannotated protein.
  
     0.631
PCC6912_37620
Unannotated protein.
  
     0.630
PCC6912_40760
Unannotated protein.
  
     0.622
Your Current Organism:
Chlorogloeopsis fritschii
NCBI taxonomy Id: 211165
Other names: C. fritschii PCC 6912, Chlorogloeopsis fritschii PCC 6912, Chlorogloeopsis fritschii str. PCC 6912, Chlorogloeopsis sp. ATCC 27193, Chlorogloeopsis sp. DSM 101459, Chlorogloeopsis sp. PCC 6912
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.