STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lipAUnannotated protein. (225 aa)    
Predicted Functional Partners:
PCC6912_55240
Unannotated protein.
    
 0.812
PCC6912_48750
Unannotated protein.
    
 0.812
PCC6912_48690
Unannotated protein; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.812
rpmA
Unannotated protein; Belongs to the bacterial ribosomal protein bL27 family.
   
   0.758
rplU
Unannotated protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
    
   0.756
rplT
Unannotated protein; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
    
   0.756
rpmB
Unannotated protein; Belongs to the bacterial ribosomal protein bL28 family.
    
   0.756
rpmG
Unannotated protein; Belongs to the bacterial ribosomal protein bL33 family.
    
   0.756
rplK
Unannotated protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
    
   0.756
PCC6912_53740
Unannotated protein.
    
   0.756
Your Current Organism:
Chlorogloeopsis fritschii
NCBI taxonomy Id: 211165
Other names: C. fritschii PCC 6912, Chlorogloeopsis fritschii PCC 6912, Chlorogloeopsis fritschii str. PCC 6912, Chlorogloeopsis sp. ATCC 27193, Chlorogloeopsis sp. DSM 101459, Chlorogloeopsis sp. PCC 6912
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.