rpmG-1 protein (Mycoplasma californicum) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

rpmG-1

50S ribosomal protein L33. (49 aa)

Predicted Functional Partners:

rplL

0.981

rpmB

0.981

rpsR

0.981

rplM

0.981

rplJ

0.980

rplU

0.980

rpmA

0.980

rpmF

0.980

rpsK

0.980

rplQ

0.980

Your Current Organism:

Mycoplasma californicum

NCBI taxonomy Id: 2113
Other names: ATCC 33461, DSM 21477, M. californicum, NCTC 10189, strain ST-6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplJ	rplL	MCFN_00465	MCFN_00470	50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L7/L12; Present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
rplJ	rplM	MCFN_00465	MCFN_02890	50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
rplJ	rplQ	MCFN_00465	MCFN_01700	50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
rplJ	rplU	MCFN_00465	MCFN_00835	50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
rplJ	rpmA	MCFN_00465	MCFN_00840	50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
rplJ	rpmB	MCFN_00465	MCFN_01020	50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
rplJ	rpmF	MCFN_00465	MCFN_01220	50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
rplJ	rpmG-1	MCFN_00465	MCFN_00078	50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L33.	0.980
rplJ	rpsK	MCFN_00465	MCFN_01690	50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.999
rplJ	rpsR	MCFN_00465	MCFN_02050	50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S18; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
rplL	rplJ	MCFN_00470	MCFN_00465	50S ribosomal protein L7/L12; Present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
rplL	rplM	MCFN_00470	MCFN_02890	50S ribosomal protein L7/L12; Present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
rplL	rplQ	MCFN_00470	MCFN_01700	50S ribosomal protein L7/L12; Present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
rplL	rplU	MCFN_00470	MCFN_00835	50S ribosomal protein L7/L12; Present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
rplL	rpmA	MCFN_00470	MCFN_00840	50S ribosomal protein L7/L12; Present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
rplL	rpmB	MCFN_00470	MCFN_01020	50S ribosomal protein L7/L12; Present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
rplL	rpmF	MCFN_00470	MCFN_01220	50S ribosomal protein L7/L12; Present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
rplL	rpmG-1	MCFN_00470	MCFN_00078	50S ribosomal protein L7/L12; Present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L33.	0.981
rplL	rpsK	MCFN_00470	MCFN_01690	50S ribosomal protein L7/L12; Present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.998
rplL	rpsR	MCFN_00470	MCFN_02050	50S ribosomal protein L7/L12; Present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S18; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998