Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AIA29775.1 | atpA | MCFN_03340 | MCFN_02285 | 5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.579 |
| AIA29775.1 | gidA | MCFN_03340 | MCFN_00225 | 5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.647 |
| AIA29775.1 | metS | MCFN_03340 | MCFN_00455 | 5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | methionyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.891 |
| AIA29775.1 | rlmH | MCFN_03340 | MCFN_00220 | 5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.412 |
| AIA29775.1 | secDF | MCFN_03340 | MCFN_01325 | 5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Bifunctional preprotein translocase subunit SecD/SecF; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.796 |
| AIA29775.1 | topA | MCFN_03340 | MCFN_02030 | 5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA topoisomerase I; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.969 |
| AIA29775.1 | trmE | MCFN_03340 | MCFN_02610 | 5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | tRNA modification GTPase TrmE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.766 |
| atpA | AIA29775.1 | MCFN_02285 | MCFN_03340 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | 5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.579 |
| atpA | gidA | MCFN_02285 | MCFN_00225 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.555 |
| atpA | metS | MCFN_02285 | MCFN_00455 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | methionyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.501 |
| atpA | rplF | MCFN_02285 | MCFN_02345 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.651 |
| atpA | secDF | MCFN_02285 | MCFN_01325 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | Bifunctional preprotein translocase subunit SecD/SecF; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.672 |
| atpA | topA | MCFN_02285 | MCFN_02030 | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA topoisomerase I; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.470 |
| gidA | AIA29775.1 | MCFN_00225 | MCFN_03340 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.647 |
| gidA | atpA | MCFN_00225 | MCFN_02285 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; Derived by automated computational analysis using gene prediction method: Protein Homology. | F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.555 |
| gidA | gtsA | MCFN_00225 | MCFN_00230 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycerol ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.578 |
| gidA | metS | MCFN_00225 | MCFN_00455 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; Derived by automated computational analysis using gene prediction method: Protein Homology. | methionyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.601 |
| gidA | rlmH | MCFN_00225 | MCFN_00220 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.858 |
| gidA | rplF | MCFN_00225 | MCFN_02345 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.704 |
| gidA | secDF | MCFN_00225 | MCFN_01325 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Bifunctional preprotein translocase subunit SecD/SecF; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.707 |
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