STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rplJ50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)    
Predicted Functional Partners:
rplL
50S ribosomal protein L7/L12; Present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.997
rplR
50S ribosomal protein L18; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.997
rplF
50S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.997
rplE
50S ribosomal protein L5; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.997
rplX
50S ribosomal protein L24; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.997
rpmC
50S ribosomal protein L29; One of the stabilizing components for the large ribosomal subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.997
rplV
50S ribosomal protein L22; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.997
rplW
50S ribosomal protein L23; Binds third domain of 23S rRNA and protein L29; part of exit tunnel; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.997
rplA
50S ribosomal protein L1; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.997
rplO
50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.996
Your Current Organism:
Mycoplasma californicum
NCBI taxonomy Id: 2113
Other names: ATCC 33461, DSM 21477, M. californicum, NCTC 10189, strain ST-6
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