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MCFN_00475 protein (Mycoplasma californicum) - STRING interaction network
"MCFN_00475" - Lipoprotein in Mycoplasma californicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCFN_00475Lipoprotein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (661 aa)    
Predicted Functional Partners:
MCFN_01830
Lipoprotein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (340 aa)
   
          0.744
MCFN_01775
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (786 aa)
   
          0.639
rplL
50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation (123 aa)
              0.611
MCFN_01420
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (298 aa)
 
          0.605
MCFN_01645
Conjugal transfer protein TraE; Derived by automated computational analysis using gene prediction method- Protein Homology (934 aa)
 
          0.594
MCFN_01900
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (1787 aa)
 
     
  0.579
MCFN_02550
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (458 aa)
 
          0.579
oppB-3
Putative oligopeptide ABC transporter permease protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (304 aa)
 
          0.547
rplJ
50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors (167 aa)
              0.519
MCFN_00215
Lipoprotein, acid phosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology (406 aa)
 
          0.447
Your Current Organism:
Mycoplasma californicum
NCBI taxonomy Id: 2113
Other names: ATCC 33461, DSM 21477, M. californicum, Mycoplasma californicum, NCTC 10189, strain ST-6
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