potA protein (Mycoplasma californicum) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

potA

Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (458 aa)

Predicted Functional Partners:

potB

0.996

potC

0.996

potD

0.988

AIA29775.1

0.980

AIA29583.1

0.953

oppD-2

0.952

oppD-1

0.949

cbiO1

0.931

gtsB

0.908

AIA29584.1

0.908

Your Current Organism:

Mycoplasma californicum

NCBI taxonomy Id: 2113
Other names: ATCC 33461, DSM 21477, M. californicum, NCTC 10189, strain ST-6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIA29583.1	AIA29584.1	MCFN_02230	MCFN_02235	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
AIA29583.1	cbiO1	MCFN_02230	MCFN_01470	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.574
AIA29583.1	gtsB	MCFN_02230	MCFN_00235	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycerol ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.895
AIA29583.1	potA	MCFN_02230	MCFN_00610	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953
AIA29583.1	potB	MCFN_02230	MCFN_00615	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.610
AIA29583.1	potC	MCFN_02230	MCFN_00618	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter permease protein.	0.606
AIA29583.1	potD	MCFN_02230	MCFN_00635	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.662
AIA29584.1	AIA29583.1	MCFN_02235	MCFN_02230	ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
AIA29584.1	oppD-1	MCFN_02235	MCFN_00725	ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.573
AIA29584.1	oppD-2	MCFN_02235	MCFN_01805	ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.573
AIA29584.1	potA	MCFN_02235	MCFN_00610	ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.908
AIA29584.1	potB	MCFN_02235	MCFN_00615	ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.617
AIA29584.1	potC	MCFN_02235	MCFN_00618	ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter permease protein.	0.640
AIA29584.1	potD	MCFN_02235	MCFN_00635	ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.602
AIA29775.1	potA	MCFN_03340	MCFN_00610	5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980
cbiO1	AIA29583.1	MCFN_01470	MCFN_02230	Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.574
cbiO1	potA	MCFN_01470	MCFN_00610	Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.931
gtsB	AIA29583.1	MCFN_00235	MCFN_02230	Glycerol ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.895
gtsB	oppD-1	MCFN_00235	MCFN_00725	Glycerol ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.573
gtsB	oppD-2	MCFN_00235	MCFN_01805	Glycerol ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.573