potC protein (Mycoplasma californicum) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

potC

Spermidine/putrescine ABC transporter permease protein. (276 aa)

Predicted Functional Partners:

potB

0.999

potD

0.998

potA

0.996

oppA

0.718

oppC-1

0.679

oppC-2

0.679

AIA29429.1

0.641

AIA29550.1

0.641

gtsB

0.640

AIA29584.1

0.640

Your Current Organism:

Mycoplasma californicum

NCBI taxonomy Id: 2113
Other names: ATCC 33461, DSM 21477, M. californicum, NCTC 10189, strain ST-6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIA29429.1	AIA29584.1	MCFN_01425	MCFN_02235	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.591
AIA29429.1	gtsB	MCFN_01425	MCFN_00235	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycerol ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.591
AIA29429.1	oppA	MCFN_01425	MCFN_00710	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.618
AIA29429.1	oppC-1	MCFN_01425	MCFN_00720	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.572
AIA29429.1	oppC-2	MCFN_01425	MCFN_01810	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.572
AIA29429.1	potA	MCFN_01425	MCFN_00610	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.563
AIA29429.1	potB	MCFN_01425	MCFN_00615	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.629
AIA29429.1	potC	MCFN_01425	MCFN_00618	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter permease protein.	0.641
AIA29429.1	potD	MCFN_01425	MCFN_00635	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.630
AIA29550.1	AIA29584.1	MCFN_02060	MCFN_02235	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.591
AIA29550.1	gtsB	MCFN_02060	MCFN_00235	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycerol ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.591
AIA29550.1	oppA	MCFN_02060	MCFN_00710	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.618
AIA29550.1	oppC-1	MCFN_02060	MCFN_00720	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.572
AIA29550.1	oppC-2	MCFN_02060	MCFN_01810	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.572
AIA29550.1	potA	MCFN_02060	MCFN_00610	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.599
AIA29550.1	potB	MCFN_02060	MCFN_00615	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.629
AIA29550.1	potC	MCFN_02060	MCFN_00618	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter permease protein.	0.641
AIA29550.1	potD	MCFN_02060	MCFN_00635	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.630
AIA29584.1	AIA29429.1	MCFN_02235	MCFN_01425	ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.591
AIA29584.1	AIA29550.1	MCFN_02235	MCFN_02060	ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.591