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MCFN_00700 protein (Mycoplasma californicum) - STRING interaction network
"MCFN_00700" - Lipoprotein in Mycoplasma californicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCFN_00700Lipoprotein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (1030 aa)    
Predicted Functional Partners:
MCFN_00705
Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (2672 aa)
              0.551
oppA
Oligopeptide ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method- Protein Homology (961 aa)
              0.544
oppB-1
Oligopeptide ABC transporter permease protein; Derived by automated computational analysis using gene prediction method- Protein Homology (357 aa)
              0.539
oppC-1
Oligopeptide ABC transporter permease protein; Derived by automated computational analysis using gene prediction method- Protein Homology (331 aa)
              0.538
manB
Phosphomannomutase; Derived by automated computational analysis using gene prediction method- Protein Homology (515 aa)
              0.430
Your Current Organism:
Mycoplasma californicum
NCBI taxonomy Id: 2113
Other names: ATCC 33461, DSM 21477, M. californicum, Mycoplasma californicum, NCTC 10189, strain ST-6
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