oppB-1 protein (Mycoplasma californicum) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

oppB-1

Oligopeptide ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (357 aa)

Predicted Functional Partners:

oppC-1

0.998

oppA

0.997

oppD-1

0.996

oppF-1

0.991

oppC-2

0.986

oppD-2

0.976

oppB-2

0.927

oppC-3

0.919

AIA29306.1

0.905

oppB-3

0.900

Your Current Organism:

Mycoplasma californicum

NCBI taxonomy Id: 2113
Other names: ATCC 33461, DSM 21477, M. californicum, NCTC 10189, strain ST-6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIA29306.1	oppA	MCFN_00705	MCFN_00710	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.956
AIA29306.1	oppB-1	MCFN_00705	MCFN_00715	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.905
AIA29306.1	oppC-1	MCFN_00705	MCFN_00720	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.857
AIA29306.1	oppD-1	MCFN_00705	MCFN_00725	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.780
AIA29306.1	oppF-1	MCFN_00705	MCFN_00730	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.860
oppA	AIA29306.1	MCFN_00710	MCFN_00705	Oligopeptide ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.956
oppA	oppB-1	MCFN_00710	MCFN_00715	Oligopeptide ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
oppA	oppB-2	MCFN_00710	MCFN_01815	Oligopeptide ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.955
oppA	oppB-3	MCFN_00710	MCFN_02025	Oligopeptide ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Putative oligopeptide ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.935
oppA	oppC-1	MCFN_00710	MCFN_00720	Oligopeptide ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
oppA	oppC-2	MCFN_00710	MCFN_01810	Oligopeptide ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.941
oppA	oppC-3	MCFN_00710	MCFN_02020	Oligopeptide ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Putative oligopeptide ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.959
oppA	oppD-1	MCFN_00710	MCFN_00725	Oligopeptide ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
oppA	oppD-2	MCFN_00710	MCFN_01805	Oligopeptide ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.963
oppA	oppF-1	MCFN_00710	MCFN_00730	Oligopeptide ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
oppB-1	AIA29306.1	MCFN_00715	MCFN_00705	Oligopeptide ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.905
oppB-1	oppA	MCFN_00715	MCFN_00710	Oligopeptide ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
oppB-1	oppB-2	MCFN_00715	MCFN_01815	Oligopeptide ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927
oppB-1	oppB-3	MCFN_00715	MCFN_02025	Oligopeptide ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Putative oligopeptide ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.900
oppB-1	oppC-1	MCFN_00715	MCFN_00720	Oligopeptide ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998