oppD-1 protein (Mycoplasma californicum) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

oppD-1

Oligopeptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (503 aa)

Predicted Functional Partners:

oppC-1

0.999

oppB-1

0.996

oppA

0.991

oppC-2

0.976

oppB-2

0.964

AIA29429.1

0.955

AIA29550.1

0.954

potA

0.949

oppF-1

0.943

oppB-3

0.936

Your Current Organism:

Mycoplasma californicum

NCBI taxonomy Id: 2113
Other names: ATCC 33461, DSM 21477, M. californicum, NCTC 10189, strain ST-6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIA29429.1	oppA	MCFN_01425	MCFN_00710	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.618
AIA29429.1	oppB-1	MCFN_01425	MCFN_00715	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.550
AIA29429.1	oppB-2	MCFN_01425	MCFN_01815	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.550
AIA29429.1	oppB-3	MCFN_01425	MCFN_02025	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Putative oligopeptide ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.550
AIA29429.1	oppC-1	MCFN_01425	MCFN_00720	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.572
AIA29429.1	oppC-2	MCFN_01425	MCFN_01810	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.572
AIA29429.1	oppD-1	MCFN_01425	MCFN_00725	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.955
AIA29429.1	oppF-1	MCFN_01425	MCFN_00730	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.912
AIA29429.1	potA	MCFN_01425	MCFN_00610	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.563
AIA29550.1	oppA	MCFN_02060	MCFN_00710	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.618
AIA29550.1	oppB-1	MCFN_02060	MCFN_00715	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.550
AIA29550.1	oppB-2	MCFN_02060	MCFN_01815	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.550
AIA29550.1	oppB-3	MCFN_02060	MCFN_02025	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Putative oligopeptide ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.618
AIA29550.1	oppC-1	MCFN_02060	MCFN_00720	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.572
AIA29550.1	oppC-2	MCFN_02060	MCFN_01810	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.572
AIA29550.1	oppD-1	MCFN_02060	MCFN_00725	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.954
AIA29550.1	oppF-1	MCFN_02060	MCFN_00730	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oligopeptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.864
AIA29550.1	potA	MCFN_02060	MCFN_00610	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.599
oppA	AIA29429.1	MCFN_00710	MCFN_01425	Oligopeptide ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.618
oppA	AIA29550.1	MCFN_00710	MCFN_02060	Oligopeptide ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.618