STRINGSTRING
hsdR protein (Mycoplasma californicum) - STRING interaction network
"hsdR" - annotation not available in Mycoplasma californicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsdRannotation not available (1039 aa)    
Predicted Functional Partners:
hsdM
Type I restriction-modification system M subunit; Derived by automated computational analysis using gene prediction method- Protein Homology (545 aa)
 
   
  0.997
hsdS-2
Type I restriction modification system specificity subunit HsdS; Derived by automated computational analysis using gene prediction method- Protein Homology (416 aa)
 
   
  0.846
MCFN_00805
AAA domain protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (211 aa)
   
        0.771
MCFN_00675
annotation not available (348 aa)
         
  0.621
hsdS-3
Type I restriction modification system specificity subunit HsdS; Derived by automated computational analysis using gene prediction method- Protein Homology (163 aa)
   
   
  0.540
hsdS-1
Type I restriction modification system specificity subunit HsdS; Derived by automated computational analysis using gene prediction method- Protein Homology (186 aa)
 
   
  0.517
MCFN_01995
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (762 aa)
   
        0.438
MCFN_02160
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (79 aa)
              0.416
uvrC
UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5’ and 3’ sides of the lesion. The N-terminal half is responsible for the 3’ incision and the C-terminal half is responsible for the 5’ incision (572 aa)
              0.416
MCFN_01755
Methyltransferase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the N(4)/N(6)-methyltransferase family (370 aa)
              0.416
Your Current Organism:
Mycoplasma californicum
NCBI taxonomy Id: 2113
Other names: ATCC 33461, DSM 21477, M. californicum, Mycoplasma californicum, NCTC 10189, strain ST-6
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