hsdR protein (Mycoplasma californicum) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Edges represent protein-protein associations

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

hsdR

Type I restriction modification system endonuclease subunit HsdR. (1039 aa)

Predicted Functional Partners:

hsdM

0.999

hsdS-2

0.792

AIA29320.1

0.737

hsdS-3

0.706

hsdS-1

0.620

Your Current Organism:

Mycoplasma californicum

NCBI taxonomy Id: 2113
Other names: ATCC 33461, DSM 21477, M. californicum, NCTC 10189, strain ST-6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIA29320.1	hsdM	MCFN_00805	MCFN_00815	AAA domain protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Type I restriction-modification system M subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.587
AIA29320.1	hsdR	MCFN_00805	MCFN_00820	AAA domain protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Type I restriction modification system endonuclease subunit HsdR.	0.737
AIA29320.1	hsdS-3	MCFN_00805	MCFN_00800	AAA domain protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Type I restriction modification system specificity subunit HsdS; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.733
hsdM	AIA29320.1	MCFN_00815	MCFN_00805	Type I restriction-modification system M subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	AAA domain protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.587
hsdM	hsdR	MCFN_00815	MCFN_00820	Type I restriction-modification system M subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type I restriction modification system endonuclease subunit HsdR.	0.999
hsdM	hsdS-1	MCFN_00815	MCFN_00785	Type I restriction-modification system M subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type I restriction modification system specificity subunit HsdS; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.969
hsdM	hsdS-2	MCFN_00815	MCFN_00795	Type I restriction-modification system M subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type I restriction modification system specificity subunit HsdS; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
hsdM	hsdS-3	MCFN_00815	MCFN_00800	Type I restriction-modification system M subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type I restriction modification system specificity subunit HsdS; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980
hsdR	AIA29320.1	MCFN_00820	MCFN_00805	Type I restriction modification system endonuclease subunit HsdR.	AAA domain protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.737
hsdR	hsdM	MCFN_00820	MCFN_00815	Type I restriction modification system endonuclease subunit HsdR.	Type I restriction-modification system M subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
hsdR	hsdS-1	MCFN_00820	MCFN_00785	Type I restriction modification system endonuclease subunit HsdR.	Type I restriction modification system specificity subunit HsdS; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.620
hsdR	hsdS-2	MCFN_00820	MCFN_00795	Type I restriction modification system endonuclease subunit HsdR.	Type I restriction modification system specificity subunit HsdS; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.792
hsdR	hsdS-3	MCFN_00820	MCFN_00800	Type I restriction modification system endonuclease subunit HsdR.	Type I restriction modification system specificity subunit HsdS; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.706
hsdS-1	hsdM	MCFN_00785	MCFN_00815	Type I restriction modification system specificity subunit HsdS; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type I restriction-modification system M subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.969
hsdS-1	hsdR	MCFN_00785	MCFN_00820	Type I restriction modification system specificity subunit HsdS; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type I restriction modification system endonuclease subunit HsdR.	0.620
hsdS-1	hsdS-2	MCFN_00785	MCFN_00795	Type I restriction modification system specificity subunit HsdS; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type I restriction modification system specificity subunit HsdS; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.553
hsdS-2	hsdM	MCFN_00795	MCFN_00815	Type I restriction modification system specificity subunit HsdS; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type I restriction-modification system M subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
hsdS-2	hsdR	MCFN_00795	MCFN_00820	Type I restriction modification system specificity subunit HsdS; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type I restriction modification system endonuclease subunit HsdR.	0.792
hsdS-2	hsdS-1	MCFN_00795	MCFN_00785	Type I restriction modification system specificity subunit HsdS; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type I restriction modification system specificity subunit HsdS; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.553
hsdS-3	AIA29320.1	MCFN_00800	MCFN_00805	Type I restriction modification system specificity subunit HsdS; Derived by automated computational analysis using gene prediction method: Protein Homology.	AAA domain protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.733