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MCFN_00965 protein (Mycoplasma californicum) - STRING interaction network
"MCFN_00965" - Membrane protein in Mycoplasma californicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCFN_00965Membrane protein; Derived by automated computational analysis using gene prediction method- Protein Homology (848 aa)    
Predicted Functional Partners:
MCFN_00990
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (302 aa)
 
          0.963
MCFN_00995
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (176 aa)
 
          0.963
MCFN_00980
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (714 aa)
 
          0.963
lppD-2
LppD family lipoprotein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (845 aa)
 
          0.947
atpA-2
ATP F0F1 synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a catalytic subunit; Derived by automated computational analysis using gene prediction method- Protein Homology (514 aa)
 
          0.942
atpD-2
ATP synthase F0F1 subunit beta; Derived by automated computational analysis using gene prediction method- Protein Homology (458 aa)
 
          0.920
lppD-1
LppD family lipoprotein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (835 aa)
 
          0.872
MCFN_01000
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (488 aa)
              0.837
MCFN_00985
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (157 aa)
              0.818
MCFN_02055
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (603 aa)
 
          0.790
Your Current Organism:
Mycoplasma californicum
NCBI taxonomy Id: 2113
Other names: ATCC 33461, DSM 21477, M. californicum, Mycoplasma californicum, NCTC 10189, strain ST-6
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