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MCFN_01245 protein (Mycoplasma californicum) - STRING interaction network
"MCFN_01245" - Uncharacterized protein in Mycoplasma californicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCFN_01245Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (133 aa)    
Predicted Functional Partners:
gltX
Glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction- glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily (466 aa)
              0.845
MCFN_01265
ABC transporter substrate-binding lipoprotein; Similar to P37 of Mycoplasma hyorhinis; possible phosphate/phosphonate binding protein or thiamine pyrophosphate-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (455 aa)
              0.514
MCFN_01260
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (250 aa)
              0.514
MCFN_01255
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (584 aa)
              0.514
Your Current Organism:
Mycoplasma californicum
NCBI taxonomy Id: 2113
Other names: ATCC 33461, DSM 21477, M. californicum, Mycoplasma californicum, NCTC 10189, strain ST-6
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