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MCFN_01415 protein (Mycoplasma californicum) - STRING interaction network
"MCFN_01415" - Putative lipoprotein in Mycoplasma californicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCFN_01415Putative lipoprotein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (761 aa)    
Predicted Functional Partners:
MCFN_01645
Conjugal transfer protein TraE; Derived by automated computational analysis using gene prediction method- Protein Homology (934 aa)
 
          0.716
MCFN_00980
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (714 aa)
 
          0.659
MCFN_02055
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (603 aa)
   
          0.652
MCFN_00325
S41B peptidase family lipoprotein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (589 aa)
 
          0.617
lppD-1
LppD family lipoprotein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (835 aa)
 
          0.615
lppD-2
LppD family lipoprotein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (845 aa)
 
          0.601
MCFN_00320
Lipoprotein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (675 aa)
 
          0.562
MCFN_00960
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (758 aa)
 
          0.561
MCFN_00990
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (302 aa)
 
          0.558
MCFN_01010
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (796 aa)
 
          0.509
Your Current Organism:
Mycoplasma californicum
NCBI taxonomy Id: 2113
Other names: ATCC 33461, DSM 21477, M. californicum, Mycoplasma californicum, NCTC 10189, strain ST-6
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