adk protein (Mycoplasma californicum) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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[Homology]

Score

adk

Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)

Predicted Functional Partners:

secY

0.992

apt

0.945

rpsG

0.939

hpt

0.936

rpsH

0.933

rplF

0.931

rpsQ

0.931

rpsC

0.931

rplO

0.930

rpsM

0.927

Your Current Organism:

Mycoplasma californicum

NCBI taxonomy Id: 2113
Other names: ATCC 33461, DSM 21477, M. californicum, NCTC 10189, strain ST-6

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
adk	apt	MCFN_01455	MCFN_03315	Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.945
adk	hpt	MCFN_01455	MCFN_02770	Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypoxanthine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.936
adk	rplF	MCFN_01455	MCFN_02345	Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.931
adk	rplO	MCFN_01455	MCFN_02330	Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.930
adk	rpsC	MCFN_01455	MCFN_02390	Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S3.	0.931
adk	rpsG	MCFN_01455	MCFN_00495	Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.939
adk	rpsH	MCFN_01455	MCFN_02350	Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.933
adk	rpsM	MCFN_01455	MCFN_01685	Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.	0.927
adk	rpsQ	MCFN_01455	MCFN_02375	Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.931
adk	secY	MCFN_01455	MCFN_01460	Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Preprotein translocase subunit SecY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992
apt	adk	MCFN_03315	MCFN_01455	Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.945
apt	hpt	MCFN_03315	MCFN_02770	Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypoxanthine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.527
hpt	adk	MCFN_02770	MCFN_01455	Hypoxanthine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.936
hpt	apt	MCFN_02770	MCFN_03315	Hypoxanthine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.527
rplF	adk	MCFN_02345	MCFN_01455	50S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.931
rplF	rplO	MCFN_02345	MCFN_02330	50S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
rplF	rpsC	MCFN_02345	MCFN_02390	50S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S3.	0.998
rplF	rpsG	MCFN_02345	MCFN_00495	50S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.989
rplF	rpsH	MCFN_02345	MCFN_02350	50S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
rplF	rpsM	MCFN_02345	MCFN_01685	50S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.	0.990