adk protein (Mycoplasma californicum) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

adk

Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)

Predicted Functional Partners:

secY

0.991

apt

0.939

hpt

0.936

pyk

0.933

rpsK

0.924

rpoA

0.913

rplN

0.911

rpsS

0.906

map

0.905

rplB

0.905

Your Current Organism:

Mycoplasma californicum

NCBI taxonomy Id: 2113
Other names: ATCC 33461, DSM 21477, M. californicum, NCTC 10189, strain ST-6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
adk	apt	MCFN_01455	MCFN_03315	Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.939
adk	hpt	MCFN_01455	MCFN_02770	Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypoxanthine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.936
adk	map	MCFN_01455	MCFN_01670	Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methionine aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.905
adk	pyk	MCFN_01455	MCFN_01590	Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pyruvate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.933
adk	rplB	MCFN_01455	MCFN_02405	Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.905
adk	rplN	MCFN_01455	MCFN_02370	Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.911
adk	rpoA	MCFN_01455	MCFN_01695	Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.913
adk	rpsK	MCFN_01455	MCFN_01690	Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.924
adk	rpsS	MCFN_01455	MCFN_02400	Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.906
adk	secY	MCFN_01455	MCFN_01460	Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Preprotein translocase subunit SecY; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
apt	adk	MCFN_03315	MCFN_01455	Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.939
apt	hpt	MCFN_03315	MCFN_02770	Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypoxanthine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.959
apt	rplB	MCFN_03315	MCFN_02405	Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.424
hpt	adk	MCFN_02770	MCFN_01455	Hypoxanthine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.936
hpt	apt	MCFN_02770	MCFN_03315	Hypoxanthine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.959
map	adk	MCFN_01670	MCFN_01455	Methionine aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.905
map	rplB	MCFN_01670	MCFN_02405	Methionine aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.994
map	rplN	MCFN_01670	MCFN_02370	Methionine aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
map	rpoA	MCFN_01670	MCFN_01695	Methionine aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.950
map	rpsK	MCFN_01670	MCFN_01690	Methionine aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.995