ligA protein (Mycoplasma californicum) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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[Homology]

Score

ligA

DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (662 aa)

Predicted Functional Partners:

tpiA

0.794

leuS

0.781

topA

0.713

AIA29775.1

0.668

pcrA

0.632

cbiO1

0.615

cbiO2

0.615

cbiQ

0.615

pgk

0.606

uvrA

0.542

Your Current Organism:

Mycoplasma californicum

NCBI taxonomy Id: 2113
Other names: ATCC 33461, DSM 21477, M. californicum, NCTC 10189, strain ST-6

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIA29775.1	leuS	MCFN_03340	MCFN_01525	5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	leucyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.529
AIA29775.1	ligA	MCFN_03340	MCFN_01485	5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.668
AIA29775.1	pcrA	MCFN_03340	MCFN_01865	5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-dependent DNA helicase PcrA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.853
AIA29775.1	pgk	MCFN_03340	MCFN_01495	5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.617
AIA29775.1	topA	MCFN_03340	MCFN_02030	5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA topoisomerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.906
AIA29775.1	tpiA	MCFN_03340	MCFN_01490	5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Triosephosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.691
AIA29775.1	uvrA	MCFN_03340	MCFN_00885	5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Excinuclease ABC subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.668
cbiO1	cbiO2	MCFN_01470	MCFN_01475	Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	With CbiNQ forms the ABC transporter for cobalt import; Mycoplasmas have two adjacent copies of this gene; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.970
cbiO1	cbiQ	MCFN_01470	MCFN_01480	Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
cbiO1	ligA	MCFN_01470	MCFN_01485	Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.615
cbiO1	tpiA	MCFN_01470	MCFN_01490	Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Triosephosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.496
cbiO2	cbiO1	MCFN_01475	MCFN_01470	With CbiNQ forms the ABC transporter for cobalt import; Mycoplasmas have two adjacent copies of this gene; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.970
cbiO2	cbiQ	MCFN_01475	MCFN_01480	With CbiNQ forms the ABC transporter for cobalt import; Mycoplasmas have two adjacent copies of this gene; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
cbiO2	ligA	MCFN_01475	MCFN_01485	With CbiNQ forms the ABC transporter for cobalt import; Mycoplasmas have two adjacent copies of this gene; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.615
cbiO2	tpiA	MCFN_01475	MCFN_01490	With CbiNQ forms the ABC transporter for cobalt import; Mycoplasmas have two adjacent copies of this gene; Derived by automated computational analysis using gene prediction method: Protein Homology.	Triosephosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.496
cbiQ	cbiO1	MCFN_01480	MCFN_01470	Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
cbiQ	cbiO2	MCFN_01480	MCFN_01475	Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	With CbiNQ forms the ABC transporter for cobalt import; Mycoplasmas have two adjacent copies of this gene; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
cbiQ	ligA	MCFN_01480	MCFN_01485	Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.615
cbiQ	tpiA	MCFN_01480	MCFN_01490	Cobalt ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Triosephosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.498
leuS	AIA29775.1	MCFN_01525	MCFN_03340	leucyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.	5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.529