STRINGSTRING
MCFN_01655 protein (Mycoplasma californicum) - STRING interaction network
"MCFN_01655" - Uncharacterized protein in Mycoplasma californicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCFN_01655Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (108 aa)    
Predicted Functional Partners:
MCFN_01650
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (441 aa)
              0.860
MCFN_01640
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (1326 aa)
              0.768
MCFN_01645
Conjugal transfer protein TraE; Derived by automated computational analysis using gene prediction method- Protein Homology (934 aa)
              0.767
MCFN_01660
Lipoprotein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (497 aa)
              0.553
valS
Valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a "posttransfer" editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily (834 aa)
              0.467
folD
Bifunctional protein FolD; Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate (287 aa)
              0.467
Your Current Organism:
Mycoplasma californicum
NCBI taxonomy Id: 2113
Other names: ATCC 33461, DSM 21477, M. californicum, Mycoplasma californicum, NCTC 10189, strain ST-6
Server load: low (30%) [HD]