ssb protein (Mycoplasma californicum) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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[Homology]

Score

ssb

Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (188 aa)

Predicted Functional Partners:

rpsF

0.960

AIA29775.1

0.949

dnaE

0.902

dnaH

0.901

dnaX

0.879

rpsR

0.847

lon

0.793

topA

0.782

pdhB

0.754

dnaK

0.747

Your Current Organism:

Mycoplasma californicum

NCBI taxonomy Id: 2113
Other names: ATCC 33461, DSM 21477, M. californicum, NCTC 10189, strain ST-6

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIA29775.1	dnaE	MCFN_03340	MCFN_03345	5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase III subunit alpha; Catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.933
AIA29775.1	dnaH	MCFN_03340	MCFN_02965	5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.560
AIA29775.1	dnaK	MCFN_03340	MCFN_02545	5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molecular chaperone DnaK; Heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.569
AIA29775.1	dnaX	MCFN_03340	MCFN_02945	5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase III subunits gamma and tau; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.560
AIA29775.1	ssb	MCFN_03340	MCFN_02045	5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.949
AIA29775.1	topA	MCFN_03340	MCFN_02030	5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA topoisomerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.906
dnaE	AIA29775.1	MCFN_03345	MCFN_03340	DNA polymerase III subunit alpha; Catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology.	5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.933
dnaE	dnaH	MCFN_03345	MCFN_02965	DNA polymerase III subunit alpha; Catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.985
dnaE	dnaX	MCFN_03345	MCFN_02945	DNA polymerase III subunit alpha; Catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase III subunits gamma and tau; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.989
dnaE	ssb	MCFN_03345	MCFN_02045	DNA polymerase III subunit alpha; Catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology.	Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.902
dnaE	topA	MCFN_03345	MCFN_02030	DNA polymerase III subunit alpha; Catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA topoisomerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.607
dnaH	AIA29775.1	MCFN_02965	MCFN_03340	DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.	5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.560
dnaH	dnaE	MCFN_02965	MCFN_03345	DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase III subunit alpha; Catalyzes DNA-template-directed extension of the 3'-end of a DNA strand by one nucleotide at a time. Proposed to be responsible for the synthesis of the lagging strand. In the low GC gram positive bacteria this enzyme is less processive and more error prone than its counterpart in other bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.985
dnaH	dnaX	MCFN_02965	MCFN_02945	DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase III subunits gamma and tau; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.978
dnaH	ssb	MCFN_02965	MCFN_02045	DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.	Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.901
dnaH	topA	MCFN_02965	MCFN_02030	DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA topoisomerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
dnaK	AIA29775.1	MCFN_02545	MCFN_03340	Molecular chaperone DnaK; Heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology.	5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.569
dnaK	lon	MCFN_02545	MCFN_01530	Molecular chaperone DnaK; Heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-dependent protease La; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.897
dnaK	pdhB	MCFN_02545	MCFN_03285	Molecular chaperone DnaK; Heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pyruvate dehydrogenase E1 component subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.806
dnaK	ssb	MCFN_02545	MCFN_02045	Molecular chaperone DnaK; Heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology.	Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.747