AIA29554.1 protein (Mycoplasma californicum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Gene Fusion

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[Homology]

Score

AIA29554.1

Lipoprotein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (522 aa)

Predicted Functional Partners:

AIA29549.1

0.470

AIA29550.1

0.470

AIA29551.1

0.470

AIA29552.1

0.470

AIA29553.1

0.470

Your Current Organism:

Mycoplasma californicum

NCBI taxonomy Id: 2113
Other names: ATCC 33461, DSM 21477, M. californicum, NCTC 10189, strain ST-6

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIA29549.1	AIA29550.1	MCFN_02055	MCFN_02060	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.983
AIA29549.1	AIA29551.1	MCFN_02055	MCFN_02065	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lipoprotein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.830
AIA29549.1	AIA29552.1	MCFN_02055	MCFN_02070	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lipoprotein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.830
AIA29549.1	AIA29553.1	MCFN_02055	MCFN_02075	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.830
AIA29549.1	AIA29554.1	MCFN_02055	MCFN_02080	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lipoprotein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.470
AIA29550.1	AIA29549.1	MCFN_02060	MCFN_02055	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.983
AIA29550.1	AIA29551.1	MCFN_02060	MCFN_02065	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lipoprotein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.830
AIA29550.1	AIA29552.1	MCFN_02060	MCFN_02070	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lipoprotein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.830
AIA29550.1	AIA29553.1	MCFN_02060	MCFN_02075	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.830
AIA29550.1	AIA29554.1	MCFN_02060	MCFN_02080	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Lipoprotein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.470
AIA29551.1	AIA29549.1	MCFN_02065	MCFN_02055	Lipoprotein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.830
AIA29551.1	AIA29550.1	MCFN_02065	MCFN_02060	Lipoprotein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.830
AIA29551.1	AIA29552.1	MCFN_02065	MCFN_02070	Lipoprotein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Lipoprotein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.830
AIA29551.1	AIA29553.1	MCFN_02065	MCFN_02075	Lipoprotein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.830
AIA29551.1	AIA29554.1	MCFN_02065	MCFN_02080	Lipoprotein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Lipoprotein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.470
AIA29552.1	AIA29549.1	MCFN_02070	MCFN_02055	Lipoprotein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.830
AIA29552.1	AIA29550.1	MCFN_02070	MCFN_02060	Lipoprotein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.830
AIA29552.1	AIA29551.1	MCFN_02070	MCFN_02065	Lipoprotein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Lipoprotein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.830
AIA29552.1	AIA29553.1	MCFN_02070	MCFN_02075	Lipoprotein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.830
AIA29552.1	AIA29554.1	MCFN_02070	MCFN_02080	Lipoprotein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Lipoprotein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.470