rplC protein (Mycoplasma californicum) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

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[Homology]

Score

rplC

50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa)

Predicted Functional Partners:

rplP

0.999

rplV

0.999

rplB

0.999

rplW

0.999

rplD

0.999

rplO

0.998

rplR

0.998

rplF

0.998

rplE

0.998

rplN

0.998

Your Current Organism:

Mycoplasma californicum

NCBI taxonomy Id: 2113
Other names: ATCC 33461, DSM 21477, M. californicum, NCTC 10189, strain ST-6

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplB	rplC	MCFN_02405	MCFN_02420	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
rplB	rplD	MCFN_02405	MCFN_02415	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	50S ribosomal protein L4; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
rplB	rplE	MCFN_02405	MCFN_02360	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	50S ribosomal protein L5; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
rplB	rplF	MCFN_02405	MCFN_02345	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	50S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
rplB	rplN	MCFN_02405	MCFN_02370	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
rplB	rplO	MCFN_02405	MCFN_02330	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
rplB	rplP	MCFN_02405	MCFN_02385	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.999
rplB	rplR	MCFN_02405	MCFN_02340	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	50S ribosomal protein L18; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
rplB	rplV	MCFN_02405	MCFN_02395	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	50S ribosomal protein L22; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
rplB	rplW	MCFN_02405	MCFN_02410	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	50S ribosomal protein L23; Binds third domain of 23S rRNA and protein L29; part of exit tunnel; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
rplC	rplB	MCFN_02420	MCFN_02405	50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.999
rplC	rplD	MCFN_02420	MCFN_02415	50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L4; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
rplC	rplE	MCFN_02420	MCFN_02360	50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L5; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
rplC	rplF	MCFN_02420	MCFN_02345	50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
rplC	rplN	MCFN_02420	MCFN_02370	50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
rplC	rplO	MCFN_02420	MCFN_02330	50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
rplC	rplP	MCFN_02420	MCFN_02385	50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.	0.999
rplC	rplR	MCFN_02420	MCFN_02340	50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L18; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
rplC	rplV	MCFN_02420	MCFN_02395	50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L22; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
rplC	rplW	MCFN_02420	MCFN_02410	50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L23; Binds third domain of 23S rRNA and protein L29; part of exit tunnel; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999