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MCFN_02550 protein (Mycoplasma californicum) - STRING interaction network
"MCFN_02550" - Uncharacterized protein in Mycoplasma californicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCFN_02550Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (458 aa)    
Predicted Functional Partners:
MCFN_02560
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (156 aa)
              0.845
MCFN_01900
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (1787 aa)
 
          0.793
MCFN_00170
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (2672 aa)
 
          0.778
MCFN_01775
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (786 aa)
   
          0.768
MCFN_03265
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- GeneMarkS+ (215 aa)
   
          0.760
MCFN_00380
DnaB-related protein; Derived by automated computational analysis using gene prediction method- Protein Homology (323 aa)
 
          0.757
drpA
DNA processing protein DprA (SMF); Derived by automated computational analysis using gene prediction method- Protein Homology (243 aa)
   
   
  0.752
pheT
Phenylalanine--tRNA ligase beta subunit; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily (725 aa)
 
        0.718
recO
DNA repair protein RecO; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the RecO family (227 aa)
 
   
  0.712
MCFN_03200
annotation not available (472 aa)
 
          0.699
Your Current Organism:
Mycoplasma californicum
NCBI taxonomy Id: 2113
Other names: ATCC 33461, DSM 21477, M. californicum, Mycoplasma californicum, NCTC 10189, strain ST-6
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