trmE protein (Mycoplasma californicum) - STRING interaction network

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second shell of interactors

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Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

trmE

tRNA modification GTPase TrmE; Derived by automated computational analysis using gene prediction method: Protein Homology. (445 aa)

Predicted Functional Partners:

gidA

0.988

dnaJ

0.981

rplK

0.981

rplO

0.979

engB

0.969

rplU

0.966

AIA29217.1

0.965

acpP

0.962

rplQ

0.961

rplM

0.946

Your Current Organism:

Mycoplasma californicum

NCBI taxonomy Id: 2113
Other names: ATCC 33461, DSM 21477, M. californicum, NCTC 10189, strain ST-6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIA29217.1	acpP	MCFN_00190	MCFN_03175	GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
AIA29217.1	dnaJ	MCFN_00190	MCFN_03090	GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.967
AIA29217.1	engB	MCFN_00190	MCFN_01600	GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ribosome biogenesis GTP-binding protein YsxC (EngB); Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
AIA29217.1	rplK	MCFN_00190	MCFN_03155	GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.983
AIA29217.1	rplM	MCFN_00190	MCFN_02890	GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
AIA29217.1	rplO	MCFN_00190	MCFN_02330	GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
AIA29217.1	rplQ	MCFN_00190	MCFN_01700	GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.986
AIA29217.1	rplU	MCFN_00190	MCFN_00835	GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.986
AIA29217.1	trmE	MCFN_00190	MCFN_02610	GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	tRNA modification GTPase TrmE; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.965
acpP	AIA29217.1	MCFN_03175	MCFN_00190	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
acpP	dnaJ	MCFN_03175	MCFN_03090	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.987
acpP	engB	MCFN_03175	MCFN_01600	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ribosome biogenesis GTP-binding protein YsxC (EngB); Derived by automated computational analysis using gene prediction method: Protein Homology.	0.964
acpP	rplK	MCFN_03175	MCFN_03155	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.990
acpP	rplM	MCFN_03175	MCFN_02890	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
acpP	rplO	MCFN_03175	MCFN_02330	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.982
acpP	rplQ	MCFN_03175	MCFN_01700	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
acpP	rplU	MCFN_03175	MCFN_00835	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
acpP	trmE	MCFN_03175	MCFN_02610	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	tRNA modification GTPase TrmE; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.962
dnaJ	AIA29217.1	MCFN_03090	MCFN_00190	Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.	GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.967
dnaJ	acpP	MCFN_03090	MCFN_03175	Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.987