Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AIA29699.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (179 aa)    
Predicted Functional Partners:
rnr
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.879
gtaB
UTP-glucose-1-phosphate uridyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.702
rplM
50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.456
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide to nicotinic acid adenine dinucleotide; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.442
lon
ATP-dependent protease La; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.418
AIA29691.1
Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.406
AIA29700.1
Cation transporting P-type ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.404
AIA29777.1
Transcription accessory protein TEX; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.400
Your Current Organism:
Mycoplasma californicum
NCBI taxonomy Id: 2113
Other names: ATCC 33461, DSM 21477, M. californicum, NCTC 10189, strain ST-6
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.