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MCFN_02990 protein (Mycoplasma californicum) - STRING interaction network
"MCFN_02990" - Uncharacterized protein in Mycoplasma californicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCFN_02990Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (76 aa)    
Predicted Functional Partners:
ftsY
Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) (352 aa)
         
  0.923
MCFN_00315
In some Mycoplasma, this protein is fused to aspartyl/glutamyl-tRNA amidotransferase subunit C domain; Derived by automated computational analysis using gene prediction method- Protein Homology (330 aa)
 
          0.744
MCFN_02150
Uncharacterized protein; Derived by automated computational analysis using gene prediction method- Protein Homology (182 aa)
 
          0.666
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA (139 aa)
 
          0.605
recO
DNA repair protein RecO; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the RecO family (227 aa)
 
          0.600
MCFN_00850
ABC transporter permease protein; Derived by automated computational analysis using gene prediction method- Protein Homology (392 aa)
 
          0.535
ffh
Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY; Belongs to the GTP-binding SRP family. SRP54 subfamily (451 aa)
         
  0.533
rpmG-2
50S ribosomal protein L33; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the bacterial ribosomal protein bL33 family (50 aa)
              0.530
MCFN_02000
Putative metal transporter; Derived by automated computational analysis using gene prediction method- Protein Homology (342 aa)
 
          0.529
MCFN_00170
ABC transporter permease; Derived by automated computational analysis using gene prediction method- Protein Homology (2672 aa)
 
          0.526
Your Current Organism:
Mycoplasma californicum
NCBI taxonomy Id: 2113
Other names: ATCC 33461, DSM 21477, M. californicum, Mycoplasma californicum, NCTC 10189, strain ST-6
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