STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIA29720.1Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (446 aa)    
Predicted Functional Partners:
adh-1
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.945
ackA-1
Acetate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.918
ackA-2
Acetate kinase; Enables the production of acetyl-CoA by phosphorylating acetate in the presence of ATP and a divalent cation; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.918
pta-2
Phosphotransacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.897
pepP
Xaa-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.876
pdhB
Pyruvate dehydrogenase E1 component subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.852
pta-1
Phosphate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.842
deoC
Deoxyribose-phosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.828
ldh
L-lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.821
AIA29724.1
Putative rRNA maturation factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.807
Your Current Organism:
Mycoplasma californicum
NCBI taxonomy Id: 2113
Other names: ATCC 33461, DSM 21477, M. californicum, NCTC 10189, strain ST-6
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.