Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
acpPAcyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (74 aa)    
Predicted Functional Partners:
rplK
50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
  
  0.958
rplU
50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.957
rplQ
50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.946
rpmF
50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.943
rplM
50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.942
rplT
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
  0.940
rplO
50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.923
rplC
50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.923
rplS
50S ribosomal protein L19; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.921
acpS
Holo-[acyl-carrier-protein] synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.921
Your Current Organism:
Mycoplasma californicum
NCBI taxonomy Id: 2113
Other names: ATCC 33461, DSM 21477, M. californicum, NCTC 10189, strain ST-6
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