STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tagDNA-3-methyladenine glycosylase I Tag. (191 aa)    
Predicted Functional Partners:
pepQ
Xaa-Pro dipeptidase PepQ; Splits dipeptides with a prolyl residue in the C-terminal position.
      
 0.970
selD
Selenophosphate synthase SelD; Synthesizes selenophosphate from selenide and ATP.
     
 0.970
guaA
GMP synthase (glutamine-hydrolysing) GuaA; Catalyzes the synthesis of GMP from XMP.
      0.893
SO_0145
Endo/excinuclease domain protein.
      0.678
glyS
glycyl-tRNA synthetase beta subunit GlyS.
       0.642
glyQ
glycyl-tRNA synthetase alpha subunit GlyQ.
       0.642
SO_4141
Oxidoreductase short-chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      0.571
mutY
Adenine glycosylase MutY; Adenine glycosylase active on G-A mispairs.
    
 0.511
SO_3127
Multifunctional transcriptional regulator of DNA repair AraC family/ DNA glycosylase / 8-oxoguanine DNA glycosylase.
     
 0.469
polA
DNA polymerase I PolA; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.400
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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