trkA protein (Shewanella oneidensis) - STRING interaction network

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trkA

Potassium uptake protein TrkA. (469 aa)

Predicted Functional Partners:

trkI

0.977

trkH

0.953

rsmB

0.946

fmt

0.852

ihfA

0.832

def

0.792

chaA

0.666

SO_0033

0.634

dprA

0.620

smg

0.620

Your Current Organism:

Shewanella oneidensis

NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SO_0033	def	SO_0033	SO_0032	Peptidoglycan-binding protein.	Peptide deformylase Def; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	0.658
SO_0033	dprA	SO_0033	SO_0034	Peptidoglycan-binding protein.	DNA processing protein DprA.	0.816
SO_0033	fmt	SO_0033	SO_0031	Peptidoglycan-binding protein.	methionyl-tRNA formyltransferase Fmt; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.	0.643
SO_0033	rsmB	SO_0033	SO_0030	Peptidoglycan-binding protein.	16S rRNA (cytosine967-C5)-methyltransferase RsmB; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	0.643
SO_0033	smg	SO_0033	SO_0035	Peptidoglycan-binding protein.	Protein of unknown function DUF494 Smg; Belongs to the Smg family.	0.848
SO_0033	trkA	SO_0033	SO_0029	Peptidoglycan-binding protein.	Potassium uptake protein TrkA.	0.634
SO_0033	trkI	SO_0033	SO_0028	Peptidoglycan-binding protein.	Potassium uptake transporter TrkI; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.	0.530
chaA	trkA	SO_1001	SO_0029	Calcium:proton antiporter ChaA.	Potassium uptake protein TrkA.	0.666
chaA	trkH	SO_1001	SO_0024	Calcium:proton antiporter ChaA.	Potassium uptake transporter TrkH; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.	0.680
def	SO_0033	SO_0032	SO_0033	Peptide deformylase Def; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	Peptidoglycan-binding protein.	0.658
def	dprA	SO_0032	SO_0034	Peptide deformylase Def; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	DNA processing protein DprA.	0.666
def	fmt	SO_0032	SO_0031	Peptide deformylase Def; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	methionyl-tRNA formyltransferase Fmt; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.	0.992
def	rsmB	SO_0032	SO_0030	Peptide deformylase Def; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	16S rRNA (cytosine967-C5)-methyltransferase RsmB; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	0.845
def	smg	SO_0032	SO_0035	Peptide deformylase Def; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	Protein of unknown function DUF494 Smg; Belongs to the Smg family.	0.654
def	trkA	SO_0032	SO_0029	Peptide deformylase Def; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	Potassium uptake protein TrkA.	0.792
def	trkI	SO_0032	SO_0028	Peptide deformylase Def; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	Potassium uptake transporter TrkI; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.	0.713
dprA	SO_0033	SO_0034	SO_0033	DNA processing protein DprA.	Peptidoglycan-binding protein.	0.816
dprA	def	SO_0034	SO_0032	DNA processing protein DprA.	Peptide deformylase Def; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.	0.666
dprA	fmt	SO_0034	SO_0031	DNA processing protein DprA.	methionyl-tRNA formyltransferase Fmt; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.	0.700
dprA	rsmB	SO_0034	SO_0030	DNA processing protein DprA.	16S rRNA (cytosine967-C5)-methyltransferase RsmB; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	0.674

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