STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gpsAGlycerol-3-phosphate dehydrogenase (NADP+) GpsA; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (338 aa)    
Predicted Functional Partners:
plyY
acyl-PO4 glycerol-3-phosphate acyltransferase PlsY; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
 
 0.994
plsB
Glycerol-3-phosphate O-acyltransferase PlsB; Belongs to the GPAT/DAPAT family.
  
 
 0.943
glpD
Aerobic glycerol-3-phosphate dehydrogenase GlpD.
  
 0.937
secB
Protein export chaperone SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.
  
  
 0.921
der
50S ribosome assembly GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
  
 0.878
yhiN
HI0933 family flavoprotein YhiN.
     
 0.859
SO_0047
Periplasmic C-terminal peptidase S41 family; Belongs to the peptidase S41A family.
     
 0.849
dgkA
Diacylglycerol kinase DgkA; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
     
 0.844
plsC
1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
 0.823
gpmA
2,3-bisphosphoglycerate-independent phosphoglycerate mutase GpmA; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
  
 
 0.810
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.