STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ktrASodium-dependent potassium uptake system NAD binding component KtrA. (232 aa)    
Predicted Functional Partners:
ktrB
Sodium-dependent potassium uptake protein integral membrane component KtrB.
 
 
 0.991
ktrB-2
Sodium-dependent potassium uptake system permease component KtrB.
 
 
 0.966
kdpD
Two component signal transduction system controlling the osmosenstive K+ channel histidine kinase KdpD.
  
  
 0.671
kdpE
Two-component system, OmpR family, KDP operon response regulator KdpE; Two component signal transduction system controlling the osmosenstive K+ channel response regulator KdpE.
       0.631
rsmB
16S rRNA (cytosine967-C5)-methyltransferase RsmB; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
   0.571
SO_3692
ABC-type macrolide family export system ATPase component.
   
 
 0.549
moaE
Molybdenum cofactor biosynthesis protein E MoaE.
   
    0.547
SO_1917
Major facilitator superfamily transporter required for growth on DMSO MFS superfamily.
   
  
 0.530
SO_2523
TonB-dependent phytase receptor.
   
  
 0.527
SO_1918
Multidrug and toxin efflux protein MATE family.
  
  
 0.521
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.