STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nlpCFamily C40 peptidase lipoprotein NlpC. (154 aa)    
Predicted Functional Partners:
ftsX
ABC-type cell division-associated export system permease component FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 
 0.801
nlpI
Globular tetratricopeptide repeat containing lipoprotein NlpI; May be involved in cell division.
    
 
 0.783
SO_0047
Periplasmic C-terminal peptidase S41 family; Belongs to the peptidase S41A family.
    
 
 0.723
prc
Periplasmic C-terminal processing protease Prc; Belongs to the peptidase S41A family.
    
 
 0.723
SO_1365
Predicted membrane protein.
   
    0.602
cysE
Serine acetyltransferase CysE.
     
 0.485
SO_1502
GTPase involved in metallocenter biosynthesis of metalloproteins COG0523 family.
 
      0.470
ftsE
ABC-type cell division-associated export system ATPase component FtsE; Part of the ABC transporter FtsEX involved in cellular division.
  
 
 0.468
kdpD
Two component signal transduction system controlling the osmosenstive K+ channel histidine kinase KdpD.
  
  
 0.467
H
Lambda phage tail length tape meausure protein H.
  
 
 0.460
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.