STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutIImidazolonepropionase HutI; Belongs to the metallo-dependent hydrolases superfamily. HutI family. (408 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase HutU; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
 0.999
hutH
Histidine ammonia-lyase HutH; Belongs to the PAL/histidase family.
 
  
 0.970
hutC
Transcriptional repressor of histidine utilization genes HutC.
 
  
 0.942
SO_3057
Phenylalanine/histidine ammonia-lyase family protein.
 
  
 0.905
SO_3299
Phenylalanine/histidine ammonia-lyase family protein.
 
  
 0.895
SO_4374
Phenylalanine/tyrosine ammonia-lyase.
 
  
 0.868
hutD
Putative histidine degradation protein HutD.
 
   
 0.839
hutG
Formimidoylglutamase HutG; Belongs to the arginase family.
 
 
 0.800
SO_0348
Phospholipid/glycerol acyltransferase family protein.
   
    0.400
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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