STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
hutCTranscriptional repressor of histidine utilization genes HutC. (235 aa)    
Predicted Functional Partners:
hutI
Imidazolonepropionase HutI; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
 
  
 0.961
hutU
Urocanate hydratase HutU; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
  
 0.946
hutD
Putative histidine degradation protein HutD.
 
  
 0.941
hutH
Histidine ammonia-lyase HutH; Belongs to the PAL/histidase family.
 
  
 0.874
fadR
Transcriptional regulator of fatty acid metabolism FadR; Multifunctional regulator of fatty acid metabolism.
  
  
 0.725
pdhR
Transcriptional repressor of pyruvate metabolism PdhR.
  
  
 0.703
ptsG
Phosphotransferase system (PTS) glucose-specific IIBC component PtsG.
  
  
 0.692
trpR
Transcriptional repressor of aromatic amino acid biosynthesis TrpR.
      
 0.662
hypR
Transcriptional regulator of proline and 4-hydroxyproline utilization HypR.
  
   
 0.657
nagA
N-acetylglucosamine-6-phosphate deacetylase NagA; Belongs to the metallo-dependent hydrolases superfamily. NagA family.
  
  
 0.628
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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