STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SO_0347Phospholipid/glycerol acyltransferase family protein. (313 aa)    
Predicted Functional Partners:
SO_0348
Phospholipid/glycerol acyltransferase family protein.
 
   
0.795
yebG
UV induced SOS regulon protein YebG.
  
     0.713
plsB
Glycerol-3-phosphate O-acyltransferase PlsB; Belongs to the GPAT/DAPAT family.
 
  
 0.643
yifB
ATP-dependent serine peptidase S16 family YifB.
       0.556
accADCB
acetyl-CoA carboxylase multifunctional enzyme AccADCB.
     
 0.489
SO_0886
Putative metal-binding protein of unknown function DUF2387.
   
    0.429
pyrD
Dihydroorotate dehydrogenase PyrD; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
   
    0.412
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.