Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SO_0347Phospholipid/glycerol acyltransferase family protein. (313 aa)    
Predicted Functional Partners:
SO_0348
Phospholipid/glycerol acyltransferase family protein.
 
   
0.795
yebG
UV induced SOS regulon protein YebG.
  
     0.713
plsB
Glycerol-3-phosphate O-acyltransferase PlsB; Belongs to the GPAT/DAPAT family.
 
  
 0.640
yifB
ATP-dependent serine peptidase S16 family YifB.
       0.564
accADCB
acetyl-CoA carboxylase multifunctional enzyme AccADCB.
  
  
 0.481
SO_0886
Putative metal-binding protein of unknown function DUF2387.
   
    0.429
rapA
RNA polymerase-associated helicase RapA; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily.
 
   0.417
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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