STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SO_0352Two component signal transduction system histidine kinase. (359 aa)    
Predicted Functional Partners:
SO_0351
Two component signal transduction system response regulator LuxR family.
 0.998
narP
Nitrate/nitrite-responsive two component signal transduction system response regulator NarP.
 
 
 0.919
rcsB
Two-component system, NarL family, captular synthesis response regulator RcsB; Two component signal transduction system response regulator of capsule flagella and curli biosynthesis RcsB.
 
 
 0.903
SO_3305
Two component signal transduction system response regulator LuxR family.
 
 
 0.886
uvrY
Two component signal transduction system response regulator UvrY.
 
 
 0.872
SO_2648
Two component signal transduction system response regulator activating acetyl-CoA synthase LuxR family.
 
 
 0.808
csgD
Transcriptional activator of curli operon CsgD.
 
 
 0.778
SO_2725
Transcriptional regulator LuxR family.
 
 
 0.761
SO_0341
Multifunctional sensory protein/diguanylate cyclase/signalling protein with EAL domain.
   
 
 0.746
narQ
Nitrate/nitrite-responsive two component signal transduction system histidine kinase NarQ.
  
     0.729
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.