Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sirHCytochrome c maturation system periplasmic thioredoxin SirH. (194 aa)    
Predicted Functional Partners:
sirE
Cytochrome c maturation system haem lyase subunit SirE.
  
  
 0.959
selR
methionine-R-sulfoxide reductase SelR; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.923
sirF
Cytochrome c maturation system haem lyase subunit SirF; Possible subunit of a heme lyase.
     
 0.872
ccmI
Apo-cytochrome c chaperone CcmI.
  
  
 0.813
ccmH
Cytochrome c synthetase subunit CcmH; Possible subunit of a heme lyase.
     
 0.763
senC
Cytochrome c oxidase biogenesis protein SenC.
 
 
 0.730
ccmG
Cytochrome c maturation system membrane anchored thioredoxin CcmG.
  
   
 0.728
sirG
Cytochrome c maturation system haem lyase subunit SirG.
  
  
 0.683
hisA
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase HisA.
     
 0.667
SO_3117
Thioredoxin.
  
     0.661
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.